Co-expression analysis

Gene ID TaAffx.51121.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g26848: unknown protein (HF=1e+1)
Module size 28 genes
NF 0.24
%ile 40.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.90TaAffx.51121.1.S1_atCA730791--1e+1At5g26848unknown proteinO.I.H.G.S.X.
0.4260.90.93TaAffx.52280.1.S1_atCA710046--5e+1Atmg01000-O.I.H.G.S.X.
0.3854.70.93TaAffx.112272.1.S1_atCA625384--2e-4At5g42050-O.I.H.G.S.X.
0.3448.10.93Ta.19063.1.S1_atCA646746--4e+0At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.3346.90.93TaAffx.29653.1.S1_atCA637989--1e+1At5g65230AtMYB53 (myb domain protein 53)O.I.H.G.S.X.
0.3040.90.95TaAffx.115939.2.S1_atCA677586--7e-2At1g30800-O.I.H.G.S.X.
0.3040.90.92TaAffx.108746.1.S1_atCA684620--1e+0At5g46760basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2939.20.94TaAffx.112465.1.S1_s_atCA623726--3e-13At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.
0.2839.20.94Ta.22060.1.A1_atBG906078--2e-1At2g20690lumazine-binding family proteinO.I.H.G.S.X.
0.2430.30.93TaAffx.52953.1.S1_atCA698509--1e+0At5g55550RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2329.00.94TaAffx.57312.1.S1_atCA632121--7e-2At5g37550unknown proteinO.I.H.G.S.X.
0.2329.00.93TaAffx.29371.1.S1_atCA644147--4e+0At5g18310unknown proteinO.I.H.G.S.X.
0.2125.50.95TaAffx.112158.1.S1_x_atCA626538--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.2125.50.94TaAffx.31313.1.S1_atCA617546--1e+1At3g52561unknown proteinO.I.H.G.S.X.
0.2125.50.94TaAffx.38625.1.S1_atBJ224452--6e-2At2g01590CRR3 (CHLORORESPIRATORY REDUCTION 3)O.I.H.G.S.X.
0.2024.00.91TaAffx.18080.1.A1_atAL819553--3e+0Atmg01130-O.I.H.G.S.X.
0.2024.00.93TaAffx.107724.1.S1_atCA696363--4e-2At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.H.G.S.X.
0.2024.00.94TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinO.I.H.G.S.X.
0.2024.00.93TaAffx.59306.1.S1_atCA603735--1e+0At4g22570APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)O.I.H.G.S.X.
0.1922.40.94TaAffx.30598.1.S1_atCA623743--1e+0At3g05230signal peptidase subunit family proteinO.I.H.G.S.X.
0.1922.40.95TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.1922.40.95TaAffx.112158.1.S1_atCA626538--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.1821.00.92TaAffx.8043.1.S1_atCA638319--2e+0At5g49010SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)O.I.H.G.S.X.
0.1719.80.92TaAffx.57764.1.S1_atCA625262--4e+0At1g27950LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)O.I.H.G.S.X.
0.1719.80.93TaAffx.27290.1.S1_atCA678755--1e+1At3g02640unknown proteinO.I.H.G.S.X.
0.1618.20.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.1618.20.93Ta.7193.2.S1_atBG904530--3e+0At2g34690ACD11 (ACCELERATED CELL DEATH 11)O.I.H.G.S.X.
0.089.40.93Ta.20317.1.S1_x_atCA678146--4e+0At5g5985040S ribosomal protein S15A (RPS15aF)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.298.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.298.5GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.998.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.897.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.097.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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