Co-expression analysis

Gene ID TaAffx.50308.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g48185: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.05
%ile 13.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.75TaAffx.50308.1.S1_atCA742889--8e-1At3g48185unknown proteinO.I.H.G.S.X.
0.067.60.92Ta.7537.2.S1_x_atCA648066--1e+0At5g22390unknown proteinO.I.H.G.S.X.
0.067.60.92TaAffx.113218.1.S1_atCA617187--5e-3At5g42050-O.I.H.G.S.X.
0.034.70.93Ta.9486.3.S1_atCA674315--3e+0At3g29130unknown proteinO.I.H.G.S.X.
0.034.70.93TaAffx.50222.1.S1_atCA744251--8e-1At1g35333unknown proteinO.I.H.G.S.X.
0.023.60.93TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.399.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.099.4GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.299.3GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.098.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.797.1GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.596.9GSM324495Si+ B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.296.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage