Co-expression analysis

Gene ID TaAffx.50290.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g04660: glycine-rich protein (HF=2e+0)
Module size 47 genes
NF 0.28
%ile 46.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.60.86TaAffx.50290.1.S1_atCA743159--2e+0At1g04660glycine-rich proteinO.I.H.G.S.X.
0.4969.70.92TaAffx.6330.1.S1_atCA687946--2e+1At3g19150KRP6 (KIP-RELATED PROTEIN 6)O.I.H.G.S.X.
0.4969.70.92TaAffx.107728.1.S1_atCA696299--4e+0Atmg00530-O.I.H.G.S.X.
0.4464.50.93TaAffx.54172.1.S1_atCA684890--2e+1At3g47980integral membrane HPP family proteinO.I.H.G.S.X.
0.4362.20.91TaAffx.9431.1.S1_atCA599024--2e-2At5g13470unknown proteinO.I.H.G.S.X.
0.4159.60.92Ta.6594.2.S1_atCA660418--4e+0At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.3956.10.93TaAffx.59462.1.S1_atCA600120--7e-2At2g42040-O.I.H.G.S.X.
0.3854.70.92Ta.7193.2.S1_atBG904530--3e+0At2g34690ACD11 (ACCELERATED CELL DEATH 11)O.I.H.G.S.X.
0.3854.70.91TaAffx.7765.1.S1_atCA650604--2e-1At4g33870peroxidase, putativeO.I.H.G.S.X.
0.3854.70.95TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.3854.70.92TaAffx.38406.1.S1_atBJ234189--4e+0At5g64260EXL2 (EXORDIUM LIKE 2)O.I.H.G.S.X.
0.3854.70.92TaAffx.31743.1.S1_atCA608801--7e-1At1g77746unknown proteinO.I.H.G.S.X.
0.3854.70.94TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.3651.90.93Ta.10343.3.S1_atCA598392--4e+0At2g39010PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E)O.I.H.G.S.X.
0.3549.80.93TaAffx.12493.1.S1_atBJ264293--5e-1At5g48175unknown proteinO.I.H.G.S.X.
0.3448.10.92TaAffx.83154.1.S1_atCA661016--4e+0At5g55135unknown proteinO.I.H.G.S.X.
0.3244.40.92Ta.14649.1.S1_atCA484661--5e+0At5g17073unknown proteinO.I.H.G.S.X.
0.3244.40.90TaAffx.51121.1.S1_atCA730791--1e+1At5g26848unknown proteinO.I.H.G.S.X.
0.3142.70.93Ta.4063.3.S1_atCA732547--8e-1At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.3040.90.92Ta.17481.1.S1_atCA621212--6e-2At1g63090AtPP2-A11 (Phloem protein 2-A11)O.I.H.G.S.X.
0.3040.90.94TaAffx.81536.2.S1_s_atCA688555--2e-1At4g17040ATP-dependent Clp protease proteolytic subunit, putativeO.I.H.G.S.X.
0.3040.90.90TaAffx.107661.2.S1_atCA696998--2e+1At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.3040.90.94Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.3040.90.92TaAffx.9184.2.A1_atCA609218--4e+0At3g52460hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2839.20.92TaAffx.92618.1.S1_atBJ256383--2e-1At1g01650aspartic-type endopeptidase/ peptidaseO.I.H.G.S.X.
0.2839.20.93TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.2839.20.94TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-O.I.H.G.S.X.
0.2839.20.95TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.2735.60.94TaAffx.115939.2.S1_atCA677586--7e-2At1g30800-O.I.H.G.S.X.
0.2633.60.94TaAffx.24685.1.S1_atCA714323--3e+0At2g36080DNA-binding protein, putativeO.I.H.G.S.X.
0.2633.60.93TaAffx.57312.1.S1_atCA632121--7e-2At5g37550unknown proteinO.I.H.G.S.X.
0.2532.10.93Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.2532.10.94TaAffx.57764.1.S1_atCA625262--4e+0At1g27950LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)O.I.H.G.S.X.
0.2532.10.94TaAffx.111909.1.S1_atCA630666--2e+1At5g09250KIWIO.I.H.G.S.X.
0.2329.00.95TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2227.10.94Ta.2167.3.S1_a_atCA647226--3e-13At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.2125.50.95TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.2024.00.94Ta.16201.1.S1_atCA602442--3e+0At5g57535unknown proteinO.I.H.G.S.X.
0.2024.00.94TaAffx.119035.1.A1_atBJ295436--1e+0At2g13720ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)O.I.H.G.S.X.
0.1922.40.93TaAffx.80668.1.S1_atCA694164--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.1922.40.95Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.1922.40.94TaAffx.36750.1.S1_atBJ315863--4e+0At2g32050cell cycle control protein-relatedO.I.H.G.S.X.
0.1618.20.93TaAffx.66587.1.S1_atBG909343--2e+0At1g02620GTP-binding protein (SAR1A)O.I.H.G.S.X.
0.1517.10.91TaAffx.19327.1.A1_atCA643633--4e+0At5g28950unknown proteinO.I.H.G.S.X.
0.1517.10.90Ta.10240.2.S1_atCA657539--4e-15At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.1112.40.92Ta.7354.2.S1_x_atCA661631--3e-1At3g2850060S acidic ribosomal protein P2 (RPP2C)O.I.H.G.S.X.
0.1011.30.92Ta.13695.3.S1_x_atCA699811--4e+0At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.198.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.194.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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