Co-expression analysis

Gene ID	TaAffx.49749.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g79620: leucine-rich repeat transmembrane protein kinase, putative (HF=1e-12)
Module size	6 genes
NF	0.04
%ile	11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.80	TaAffx.49749.1.S1_at	CA639769	-	-	1e-12	At1g79620	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.92	Ta.19604.1.S1_at	CA653992	-	-	8e+0	At5g46795	MSP2 (microspore-specific promoter 2)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.93	TaAffx.111776.1.S1_x_at	CA633994	-	-	9e-1	At5g16650	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.92	Ta.25139.1.S1_at	CA615602	-	-	7e+0	At5g17150	-	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.93	Ta.11730.1.S1_at	CA736324	-	-	1e+0	At1g75470	ATPUP15	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.91	TaAffx.38420.1.S1_at	BJ233527	-	-	3e-1	At1g51960	IQD27 (IQ-domain 27)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.9	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.1	96.4	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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