Co-expression analysis

Gene ID	TaAffx.4642.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g13650: elongation factor family protein (HF=4e-5)
Module size	6 genes
NF	0.56
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.98	TaAffx.4642.1.S1_at	CA680111	-	-	4e-5	At5g13650	elongation factor family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.7870.1.S1_at	BJ244750	-	-	8e-3	At3g23760	-	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.98	TaAffx.6748.1.S1_at	CA678546	-	-	6e-1	At2g43930	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.13525.2.S1_at	CA681487	-	-	1e+0	At2g23040	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.98	Ta.9212.1.S1_at	CA598101	-	-	1e-1	At1g02590	aldehyde oxidase, putative	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.23765.1.S1_at	CK213032	-	-	2e-4	At4g15545	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.1	99.6	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
10.8	99.2	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
10.2	99.2	GSM324489	Si- B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.9	98.0	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.8	97.9	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.9	97.3	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM250909	TcLr1_7dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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