Co-expression analysis

Gene ID	TaAffx.4638.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g28660: PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) (HF=3e+0)
Module size	6 genes
NF	0.04
%ile	10.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.90	TaAffx.4638.1.S1_at	CA735893	-	-	3e+0	At4g28660	PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN)	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.96	Ta.21788.1.S1_at	CA702497	-	-	2e+0	At1g56530	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.87	Ta.3501.1.S1_a_at	BQ905050	-	-	2e+0	At5g65300	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.96	Ta.28540.1.A1_at	CA684174	-	-	7e-3	At4g33410	signal peptide peptidase family protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.96	Ta.7065.1.S1_at	BJ254686	-	-	4e-43	At3g03940	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.96	Ta.10956.1.A1_at	CK206000	-	-	3e-2	At1g72890	disease resistance protein (TIR-NBS class), putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.5	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
9.1	99.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.5	98.3	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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