Co-expression analysis

Gene ID	TaAffx.4445.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26560: BGLU40 (BETA GLUCOSIDASE 40) (HF=1e-3)
Module size	6 genes
NF	0.04
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.38	54.7	0.73	TaAffx.4445.1.S1_at	CA741494	-	-	1e-3	At1g26560	BGLU40 (BETA GLUCOSIDASE 40)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.77	TaAffx.5837.1.S1_at	CA697606	-	-	4e+0	At4g20410	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.80	Ta.18662.1.S1_at	CA640227	-	-	6e+0	At2g33855	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.80	TaAffx.85597.3.S1_x_at	CA617533	-	-	2e+1	At2g31600	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.77	TaAffx.9484.1.S1_at	CA597224	-	-	7e-2	At1g33520	MOS2 (modifier of snc1, 2)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.80	Ta.24791.1.A1_at	AY217116.1	NBS-LRR type resistance protein	-	2e+0	At5g58412	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.1	99.5	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.7	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.1	99.4	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.3	99.3	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
10.1	99.2	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
9.4	99.1	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.9	98.7	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2	98.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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