Co-expression analysis

Gene ID	TaAffx.39988.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g52740: heavy-metal-associated domain-containing protein (HF=4e+0)
Module size	7 genes
NF	0.47
%ile	72.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.96	TaAffx.39988.1.A1_at	BJ275531	-	-	4e+0	At5g52740	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.9126.1.A1_at	BJ323019	-	-	3e-1	At4g18501	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.25949.1.S1_a_at	CD454725	-	-	6e+0	At5g52830	WRKY27	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.11654.1.S1_at	BQ170534	-	-	1e+0	At1g60970	clathrin adaptor complex small chain family protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	Ta.25217.1.S1_s_at	CD454617	-	-	9e-6	At5g37350	RIO1 family protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.96	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.96	Ta.4701.1.S1_at	BJ270288	-	-	6e+0	At3g43270	pectinesterase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	96.8	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.3	96.7	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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