Co-expression analysis

Gene ID	TaAffx.39377.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g50480: NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6) (HF=7e+0)
Module size	6 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	TaAffx.39377.1.A1_at	BG907838	-	-	7e+0	At5g50480	NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.98	Ta.25628.1.S1_x_at	CA638117	-	-	5e-5	At5g61770	PPAN (PETER PAN-LIKE PROTEIN)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.28393.2.S1_at	CK195651	-	-	2e-27	At3g20050	ATTCP-1	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.28393.2.S1_x_at	CK195651	-	-	2e-27	At3g20050	ATTCP-1	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.6563.1.A1_x_at	BJ263201	-	-	3e-8	At2g06990	HEN2 (hua enhancer 2)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.98	Ta.4239.1.A1_at	CD914880	-	-	2e+0	At5g53120	SPDS3 (SPERMIDINE SYNTHASE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.5	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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