Co-expression analysis

Gene ID TaAffx.38635.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g61750: cupin family protein (HF=3e+0)
Module size 8 genes
NF 0.23
%ile 39.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.86TaAffx.38635.1.A1_atBJ228820--3e+0At5g61750cupin family proteinO.I.H.G.S.X.
0.4058.40.95Ta.3471.1.S1_atBT009079.1sucrose-phosphate synthase-1e+1At4g00840zinc ion bindingO.I.H.G.S.X.
0.3346.90.93TaAffx.92719.1.S1_atBJ245187--5e+0At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.2939.20.90TaAffx.38763.1.S1_atBJ211689--3e+0At2g14660unknown proteinO.I.H.G.S.X.
0.2939.20.94Ta.5600.1.S1_s_atCK216436--2e-1At1g03600photosystem II family proteinO.I.H.G.S.X.
0.1618.20.94Ta.1364.1.S1_atBJ219908geranylgeranyl hydrogenase-4e-6At1g74470geranylgeranyl reductaseO.I.H.G.S.X.
0.1415.80.92Ta.17059.1.S1_atBQ172322--5e-8At3g55760unknown proteinO.I.H.G.S.X.
0.078.60.90Ta.5969.3.S1_x_atBJ293381--2e+1At5g65230AtMYB53 (myb domain protein 53)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.899.6GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM315202target strand labeled: Sense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.998.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.697.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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