Co-expression analysis

Gene ID	TaAffx.38632.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g57040: ARR9 (RESPONSE REGULATOR 9) (HF=4e-3)
Module size	6 genes
NF	0.01
%ile	2.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.80	TaAffx.38632.1.S1_at	BJ224208	-	-	4e-3	At3g57040	ARR9 (RESPONSE REGULATOR 9)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.78	TaAffx.38488.1.A1_at	BJ228912	-	-	2e+0	At3g13550	FUS9 (FUSCA 9)	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.79	TaAffx.77616.1.S1_at	CA745263	-	-	4e+0	At3g56910	PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)	O.I.	H.G.	S.X.	Please select
-	0.7	0.85	Ta.24400.1.S1_at	CA626380	-	-	5e+0	At5g02600	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.88	Ta.4472.2.S1_at	BJ266900	-	-	6e+0	At5g29231	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.85	Ta.28404.1.S1_at	CD454641	-	-	8e-12	At1g13300	myb family transcription factor	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	97.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250913	Tc_7dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250890	Tc_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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