Co-expression analysis

Gene ID	TaAffx.38414.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g35310: MLP168 (MLP-LIKE PROTEIN 168) (HF=3e-1)
Module size	6 genes
NF	0.31
%ile	50.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.79	TaAffx.38414.1.S1_at	BJ233919	-	-	3e-1	At1g35310	MLP168 (MLP-LIKE PROTEIN 168)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.99	Ta.5057.3.A1_at	CK194001	Profilin /// Profilin	-	2e-12	At4g29350	PFN2 (PROFILIN 2)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.27101.10.S1_x_at	AJ613323	-	-	1e-26	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.98	Ta.24977.1.S1_x_at	CK205284	-	-	5e-67	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.28553.6.S1_x_at	BJ221503	-	-	7e-47	At4g02890	UBQ14	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.96	Ta.27680.1.S1_s_at	BQ162241	-	-	5e-1	At1g15825	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.6	GSM138191	genotype D39 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.5	92.5	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM246391	SB62_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
2.3	91.5	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.3	91.5	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM111229	genotype B65 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2	91.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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