Co-expression analysis

Gene ID TaAffx.38100.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g01185: unknown protein (HF=4e+0)
Module size 14 genes
NF 0.47
%ile 73.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.30.85TaAffx.38100.1.A1_atBJ250181--4e+0At3g01185unknown proteinO.I.H.G.S.X.
0.7489.40.87Ta.18125.1.S1_s_atCN009627--3e+0At5g34830unknown proteinO.I.H.G.S.X.
0.6986.90.87Ta.14578.2.S1_atCA638038--2e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.6483.60.87Ta.23376.1.S1_atCK164052--1e-2At3g01190peroxidase 27 (PER27) (P27) (PRXR7)O.I.H.G.S.X.
0.6383.10.87Ta.14578.1.S1_atBJ284920--2e+1At5g47030ATP synthase delta' chain, mitochondrialO.I.H.G.S.X.
0.5374.90.85Ta.11506.1.S1_atCK215703--8e+0At5g27810sequence-specific DNA binding / transcription factorO.I.H.G.S.X.
0.4767.90.86TaAffx.69891.1.S1_atAJ614437--7e-1At3g54020phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.4362.20.86Ta.24120.1.S1_atAY543541.1expansin EXPB7-9e+0At3g56580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3956.10.87Ta.18151.1.S1_x_atCA630263--2e+0At1g52615unknown geneO.I.H.G.S.X.
0.3956.10.87TaAffx.113545.1.S1_atCD871079--2e+0At3g27350unknown proteinO.I.H.G.S.X.
0.3753.00.90Ta.18151.2.S1_x_atCA624267--1e-2At5g67620unknown proteinO.I.H.G.S.X.
0.3549.80.87Ta.18875.1.S1_atCA643370--1e-2At5g03545unknown proteinO.I.H.G.S.X.
0.2939.20.87TaAffx.9339.1.S1_atCA601993--2e+0At3g56220transcription regulatorO.I.H.G.S.X.
0.2532.10.87Ta.4244.1.A1_atBJ262725--1e+0At3g23280zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.798.4GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.698.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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