Co-expression analysis

Gene ID	TaAffx.37859.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g22360: AtUGT85A2 (UDP-glucosyl transferase 85A2) (HF=4e-9)
Module size	38 genes
NF	0.92
%ile	99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.90	TaAffx.37859.1.A1_at	BJ261476	-	-	4e-9	At1g22360	AtUGT85A2 (UDP-glucosyl transferase 85A2)	O.I.	H.G.	S.X.	Please select
0.95	99.1	0.92	TaAffx.120368.1.A1_x_at	BJ228047	-	-	4e+0	At5g57920	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.94	98.9	0.92	Ta.9264.1.S1_at	BJ253460	-	-	2e+0	At1g52540	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.94	98.9	0.92	Ta.8284.2.A1_x_at	BQ170665	-	-	2e+0	At1g44990	unknown protein	O.I.	H.G.	S.X.	Please select
0.94	98.9	0.92	Ta.18047.1.S1_at	CA627677	-	-	9e+0	At2g06095	unknown protein	O.I.	H.G.	S.X.	Please select
0.94	98.9	0.93	Ta.10382.1.S1_at	BJ251111	-	-	4e+0	At5g04850	VPS60.2	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.88	TaAffx.113450.1.S1_at	CA612138	-	-	2e-1	At4g01330	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.91	Ta.4072.1.A1_at	BJ264536	-	-	1e+0	At2g42140	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.92	TaAffx.12284.1.S1_at	BJ274816	-	-	2e+1	At5g15802	unknown protein	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.92	Ta.8284.2.A1_at	BQ170665	-	-	2e+0	At1g44990	unknown protein	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.92	Ta.4141.1.A1_at	BJ265452	-	-	1e-1	At5g10480	PAS2 (PASTICCINO 2)	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.92	TaAffx.12606.1.S1_at	BJ249969	-	-	1e+0	At3g63420	AGG1 (Arabidopsis Ggamma-subunit 1)	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.93	Ta.18638.1.S1_at	BQ170645	-	-	5e-4	At3g15500	ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.93	TaAffx.132123.1.A1_x_at	BJ265850	-	-	6e+0	At5g48485	DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)	O.I.	H.G.	S.X.	Please select
0.92	98.5	0.91	TaAffx.38194.1.S1_at	BJ245735	-	-	3e-1	At5g45280	pectinacetylesterase, putative	O.I.	H.G.	S.X.	Please select
0.92	98.5	0.92	Ta.11392.1.A1_at	BJ265829	-	-	2e-2	At5g49070	KCS21 (3-KETOACYL-COA SYNTHASE 21)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.90	Ta.9264.2.S1_at	BJ252662	-	-	4e+0	At5g07910	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.90	TaAffx.119923.1.A1_at	BJ251625	-	-	4e+0	At2g15500	-	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.91	Ta.30925.1.S1_at	CN010303	-	-	1e+0	At1g73030	VPS46.2	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.91	Ta.9264.2.S1_a_at	BJ252662	-	-	4e+0	At5g07910	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.92	Ta.9165.1.S1_at	BQ169924	-	-	1e-1	At5g10480	PAS2 (PASTICCINO 2)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.92	Ta.9264.3.S1_x_at	BJ254125	-	-	3e+0	At5g07910	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.92	TaAffx.92842.1.S1_at	BJ245339	-	-	6e+0	At5g19729	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.93	TaAffx.132123.1.A1_at	BJ265850	-	-	6e+0	At5g48485	DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.89	TaAffx.133282.1.A1_at	BJ230001	-	-	4e+0	At1g02180	ferredoxin-related	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.90	Ta.8284.1.S1_at	CD887397	-	-	1e-1	At5g28830	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.92	Ta.3740.1.A1_at	BJ262607	-	-	1e+0	At2g25510	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.90	Ta.3740.3.S1_a_at	BJ257034	-	-	4e+0	At5g06270	unknown protein	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.88	TaAffx.38178.1.S1_at	BJ246524	-	-	1e+0	At3g12160	RABA4D (RAB GTPASE HOMOLOG A4D)	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.89	Ta.4394.1.S1_at	CD454799	-	-	3e+0	At1g21100	O-methyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.92	Ta.9073.2.A1_at	BF473357	-	-	9e+0	Atcg00430	-	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.91	Ta.9264.3.S1_at	BJ254125	-	-	3e+0	At5g07910	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.89	94.6	0.92	Ta.10270.2.A1_a_at	CA733411	-	-	2e-2	At3g49190	condensation domain-containing protein	O.I.	H.G.	S.X.	Please select
0.89	94.6	0.90	Ta.10216.2.S1_at	BJ244515	-	-	4e+0	At5g65880	unknown protein	O.I.	H.G.	S.X.	Please select
0.89	94.6	0.93	Ta.10400.1.S1_at	BJ251360	-	-	2e+1	At5g01640	PRA1.B5 (PRENYLATED RAB ACCEPTOR 1.B5)	O.I.	H.G.	S.X.	Please select
0.88	94.4	0.91	Ta.10270.1.A1_at	BQ169522	-	-	2e+0	At2g29850	unknown protein	O.I.	H.G.	S.X.	Please select
0.87	94.2	0.91	TaAffx.38060.1.S1_at	BJ252657	-	-	4e-1	At2g37700	catalytic/ iron ion binding / oxidoreductase	O.I.	H.G.	S.X.	Please select
0.85	93.8	0.91	Ta.3860.1.A1_at	BJ254876	-	-	3e+0	At1g32540	LOL1 (LSD ONE LIKE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
39.4	99.9	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
30.0	99.8	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
28.7	99.8	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1	94.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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