Co-expression analysis

Gene ID	TaAffx.37845.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g07960: ATPDIL5-1 (PDI-like 5-1) (HF=7e-1)
Module size	8 genes
NF	0.27
%ile	44.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.97	TaAffx.37845.1.A1_at	BJ262517	-	-	7e-1	At1g07960	ATPDIL5-1 (PDI-like 5-1)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.9729.2.A1_x_at	CA672059	-	-	4e-6	At5g63970	copine-related	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.5359.1.S1_at	BJ238105	-	-	3e-11	At1g48790	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.2514.1.S1_at	BQ162494	-	-	1e+0	At3g47860	apolipoprotein D-related	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.97	Ta.4382.1.S1_at	CK158657	RING-H2 finger protein	-	2e-29	At5g22000	RHF2A (RING-H2 GROUP F2A)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.97	Ta.2138.2.S1_x_at	CA632124	-	-	1e+0	At1g55840	SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.98	Ta.13236.1.S1_at	BM136267	SUSIBA2-like protein	-	2e-18	At4g26640	WRKY20	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.97	Ta.9637.1.S1_at	BJ273485	-	-	5e-1	At3g53490	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.9	99.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.8	97.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.9	96.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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