Co-expression analysis

Gene ID	TaAffx.36894.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g47500: pectinesterase family protein (HF=2e-2)
Module size	7 genes
NF	0.60
%ile	86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.88	TaAffx.36894.2.S1_at	BJ303490	-	-	2e-2	At5g47500	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.92	Ta.20540.1.S1_x_at	CK216277	-	-	3e+0	At2g44581	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.92	Ta.20540.2.S1_at	CA725867	-	-	2e+0	At2g44581	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.91	Ta.20540.3.S1_x_at	BJ318550	-	-	1e+0	At2g44581	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.20540.3.S1_at	BJ318550	-	-	1e+0	At2g44581	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.90	Ta.6309.1.A1_at	BJ307663	-	-	5e-3	At5g43810	ZLL (ZWILLE)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.92	Ta.6614.1.A1_x_at	BJ308909	-	-	2e+0	At2g39030	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.0	99.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
16.9	99.6	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
14.2	99.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
10.6	99.2	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.6	98.3	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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