Co-expression analysis

Gene ID TaAffx.35484.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g06420: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.00
%ile 0.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.71TaAffx.35484.1.S1_atBQ606889--1e+0At1g06420unknown proteinO.I.H.G.S.X.
0.012.40.86Ta.8309.3.S1_x_atCA605094--4e+0At2g22121LCR35 (Low-molecular-weight cysteine-rich 35)O.I.H.G.S.X.
-0.70.85TaAffx.122619.1.S1_atCA731643--4e+0At4g18500unknown proteinO.I.H.G.S.X.
-0.70.80Ta.1942.3.S1_atCD925044--1e+0At1g68350unknown proteinO.I.H.G.S.X.
-0.70.85Ta.30541.1.S1_atCK205876--1e-9At1g31120KUP10O.I.H.G.S.X.
-0.70.82Ta.2310.2.S1_x_atCK195011--1e-4At5g55850NOIO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.199.8GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
21.199.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
20.599.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298084Crown tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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