Co-expression analysis

Gene ID	TaAffx.33907.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g03270: unknown protein (HF=8e+0)
Module size	10 genes
NF	0.46
%ile	71.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	82.0	0.95	TaAffx.33907.1.S1_at	AJ609988	-	-	8e+0	At5g03270	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.96	Ta.4686.1.S1_at	CK151514	-	-	2e-1	At1g48980	oxidoreductase	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.95	Ta.6996.1.S1_at	BJ317930	-	-	7e-1	At5g11600	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.96	Ta.27512.1.S1_at	BT009204.1	-	-	2e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.96	Ta.7477.1.S1_at	CK209166	-	-	2e+0	At1g38630	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.11969.1.A1_a_at	CK208221	-	-	5e+0	At5g58500	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.9639.1.A1_a_at	BJ322395	-	-	4e-1	At5g03960	IQD12 (IQ-domain 12)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.97	Ta.10234.1.A1_at	CD910254	-	-	2e+0	At2g15710	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.11601.1.A1_at	BQ170431	-	-	3e+0	At3g17460	PHD finger family protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	Ta.7222.1.A1_at	BJ322973	-	-	3e-5	At2g45830	DTA2 (DOWNSTREAM TARGET OF AGL15 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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