Co-expression analysis

Gene ID	TaAffx.33403.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g14226: unknown protein (HF=2e+0)
Module size	7 genes
NF	0.45
%ile	70.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.82	TaAffx.33403.1.A1_at	BU808665	-	-	2e+0	At4g14226	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.80	TaAffx.7984.1.S1_at	CA641268	-	-	2e+1	At3g57440	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.82	TaAffx.31410.1.S1_at	CA616653	-	-	3e-1	At4g33130	-	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.82	TaAffx.109217.1.S1_at	CA678446	-	-	3e-3	At1g23940	adaptin family protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.87	TaAffx.23114.1.S1_at	CA737522	-	-	3e+0	At4g30390	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.87	Ta.7125.1.A1_at	BJ322003	-	-	1e+0	At5g61650	CYCP4	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.83	TaAffx.84870.1.S1_at	AJ613575	-	-	2e-2	At1g11240	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.0	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
9.6	99.1	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.2	98.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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