Co-expression analysis

Gene ID TaAffx.32415.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g75030: ATLP-3 (HF=1e-3)
Module size 6 genes
NF 0.91
%ile 99.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.94TaAffx.32415.1.S1_atCA595349--1e-3At1g75030ATLP-3O.I.H.G.S.X.
0.8393.40.94TaAffx.70070.1.S1_atAJ610583--6e+0At5g12030AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)O.I.H.G.S.X.
0.8393.40.94TaAffx.59706.1.S1_atCA596587--4e+0At1g75190unknown proteinO.I.H.G.S.X.
0.8393.40.95TaAffx.9482.1.S1_atCA597312--7e-2At5g40250zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.8393.40.96TaAffx.110980.1.S1_atCA650450--2e-1At4g38840auxin-responsive protein, putativeO.I.H.G.S.X.
0.7790.80.94Ta.16030.1.S1_atCA595441--1e+1At5g19370rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.199.7GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
20.799.7GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
19.899.7GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
14.799.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
11.099.3GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
10.499.2GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.398.8GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.498.6GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.098.5GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.697.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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