Co-expression analysis

Gene ID TaAffx.32308.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g19670: PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A) (HF=1e+0)
Module size 6 genes
NF 0.56
%ile 82.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.80.96TaAffx.32308.1.S1_atCA597142--1e+0At2g19670PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)O.I.H.G.S.X.
0.7389.10.97Ta.9629.2.S1_a_atBJ303172--4e+0At5g52740heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6786.30.97TaAffx.115727.1.S1_atBJ314247--4e+0At1g68120BPC3 (BASIC PENTACYSTEINE 3)O.I.H.G.S.X.
0.5779.20.97TaAffx.111296.1.S1_s_atCA644002--9e-1At2g01060myb family transcription factorO.I.H.G.S.X.
0.4260.90.97Ta.21114.2.S1_atBG604841--4e-47At3g19980ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3)O.I.H.G.S.X.
0.3651.90.97Ta.5581.3.S1_atBJ232695--1e-5At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.898.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM314263tissue type: seedling, crown - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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