Co-expression analysis

Gene ID TaAffx.31908.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g23360: GRAM domain-containing protein / ABA-responsive protein-related (HF=1e-3)
Module size 6 genes
NF 0.01
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.66TaAffx.31908.1.S1_atCA605392--1e-3At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.0910.40.83Ta.774.3.S1_atCA679601--7e-5At3g02720DJ-1 family protein / protease-relatedO.I.H.G.S.X.
0.034.70.91Ta.23735.2.S1_x_atCA635043--3e-1At4g08685SAH7O.I.H.G.S.X.
0.012.40.89TaAffx.84867.1.S1_atCA627783--4e+0At3g43970unknown proteinO.I.H.G.S.X.
0.012.40.91TaAffx.34241.2.S1_x_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
-0.70.90Ta.6170.3.S1_x_atCA648742--2e-2At4g09520catalytic/ metal ion binding / phosphoglycerate mutaseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.199.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.598.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.296.6GSM138145Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB locationLink to GEO
3.896.0GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.595.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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