Co-expression analysis

Gene ID TaAffx.31813.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g49570: LSU3 (RESPONSE TO LOW SULFUR 3) (HF=6e+0)
Module size 6 genes
NF 0.57
%ile 83.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.97TaAffx.31813.1.S1_x_atCA607079--6e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.8393.40.98TaAffx.31813.1.S1_atCA607079--6e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.8092.20.97Ta.28353.1.S1_x_atBQ752795Nar2.2 protein-7e-2At5g50200WR3 (WOUND-RESPONSIVE 3)O.I.H.G.S.X.
0.4260.90.97Ta.19183.2.S1_atCA647961--3e+1At5g21920YGGT family proteinO.I.H.G.S.X.
0.3854.70.98TaAffx.64652.1.S1_atBJ283237--5e+0At2g11015unknown proteinO.I.H.G.S.X.
0.3651.90.97Ta.24626.1.S1_atCA637891--7e-1At1g0721030S ribosomal protein S18 familyO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
116.6100.0GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
81.9100.0GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
14.199.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.595.4GSM250893TcLr34_3dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM138202genotype F44 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.692.9GSM111217genotype D15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.291.0GSM111174genotype G30 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.291.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.291.0GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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