Co-expression analysis

Gene ID TaAffx.31783.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g77240: AMP-binding protein, putative (HF=2e-2)
Module size 6 genes
NF 0.57
%ile 83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.95TaAffx.31783.1.S1_atCD921514--2e-2At1g77240AMP-binding protein, putativeO.I.H.G.S.X.
0.7790.80.96Ta.2408.1.S1_atBG605197--2e+0At1g53890unknown proteinO.I.H.G.S.X.
0.6383.10.96Ta.3467.1.S1_atCK214904--4e-18At2g14260PIPO.I.H.G.S.X.
0.6081.00.96Ta.19569.1.S1_atCA653481--5e+0At5g28000Bet v I allergen family proteinO.I.H.G.S.X.
0.5072.40.96TaAffx.93354.1.A1_atBJ215248--3e-4At5g41760nucleotide-sugar transporter family proteinO.I.H.G.S.X.
0.3142.70.96TaAffx.10805.1.S1_atBQ168937--1e-39At4g00660DEAD/DEAH box helicase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.699.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
24.699.8GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
23.999.8GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
15.399.6GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
12.499.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
9.799.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.998.0GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
5.897.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.097.4GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage