Co-expression analysis

Gene ID	TaAffx.31713.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g33320: CUE1 (CAB UNDEREXPRESSED 1) (HF=2e-5)
Module size	9 genes
NF	0.54
%ile	80.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.94	TaAffx.31713.1.S1_at	CA609334	-	-	2e-5	At5g33320	CUE1 (CAB UNDEREXPRESSED 1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.14572.1.S1_at	BJ323156	Isopentenyl pyrophosphate isomerase	-	1e-17	At3g02780	IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.10120.1.S1_at	BJ224992	-	-	6e-14	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.10120.1.S1_x_at	BJ224992	-	-	6e-14	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.862.1.A1_at	BG906352	-	-	1e+1	At5g38050	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.97	Ta.9584.1.S1_at	BJ228075	-	-	4e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.97	Ta.22353.1.S1_at	CA741400	-	-	6e-5	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.95	Ta.19852.1.S1_at	CA660553	-	-	7e-1	At4g01610	cathepsin B-like cysteine protease, putative	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.97	Ta.1121.1.S1_at	BG904461	-	-	2e-1	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.4	99.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
9.0	99.0	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.2	98.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.3	98.6	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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