Co-expression analysis

Gene ID TaAffx.31446.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g23430: ICK1 (HF=1e-1)
Module size 6 genes
NF 0.02
%ile 5.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.80.86TaAffx.31446.1.S1_atCA616225--1e-1At2g23430ICK1O.I.H.G.S.X.
0.3346.90.93Ta.5504.2.S1_atCA629406--2e+1At4g24130unknown proteinO.I.H.G.S.X.
0.1719.80.89Ta.28157.1.S1_atCA642241--3e-5At5g27200ACP5 (acyl carrier protein 5)O.I.H.G.S.X.
0.1415.80.92Ta.5504.1.S1_x_atCK211141--7e+0At1g01750ADF11 (ACTIN DEPOLYMERIZING FACTOR 11)O.I.H.G.S.X.
0.067.60.92Ta.20894.1.A1_atCA640912--3e-2At5g66560phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
-0.70.86Ta.30123.1.S1_atBJ266625--1e+1At4g13150unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.499.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
30.699.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
29.799.8GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
21.099.7GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.199.7GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.499.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
12.799.4GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.499.2GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.199.2GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
10.099.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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