Co-expression analysis

Gene ID	TaAffx.31436.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g05340: peroxidase, putative (HF=1e-3)
Module size	6 genes
NF	0.14
%ile	27.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.80	TaAffx.31436.1.S1_at	CA616455	-	-	1e-3	At5g05340	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.23895.1.S1_x_at	CK205337	-	-	3e-55	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.96	TaAffx.38158.4.S1_x_at	CA630021	-	-	1e-3	At2g44330	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.97	Ta.2305.2.S1_x_at	CD909723	-	-	5e+0	At5g57000	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.97	Ta.27101.10.S1_x_at	AJ613323	-	-	1e-26	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.97	AFFX-Tae-r2-Ec-bioB-3_at	AFFX-Tae-r2-Ec-bioB-3	-	-			-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.3	91.5	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.0	89.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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