Co-expression analysis

Gene ID	TaAffx.31073.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g25880: auxin-resistance protein, putative (HF=4e+0)
Module size	6 genes
NF	0.15
%ile	28.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.76	TaAffx.31073.1.S1_at	CA619727	-	-	4e+0	At3g25880	auxin-resistance protein, putative	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.93	TaAffx.135182.1.S1_x_at	CA673772	-	-	2e+1	At5g23640	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.93	TaAffx.112720.1.S1_at	CA621571	-	-	7e-5	At5g39580	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.93	TaAffx.50318.1.S1_at	CA742779	-	-	3e+0	At3g25400	-	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.91	TaAffx.38399.1.S1_at	BJ234422	-	-	1e+0	At3g61930	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.91	TaAffx.55497.1.S1_at	CA665286	-	-	3e-1	At5g62610	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.9	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.4	98.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5	98.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5	98.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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