Co-expression analysis

Gene ID	TaAffx.31044.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g25490: wall-associated kinase, putative (HF=4e-4)
Module size	6 genes
NF	0.01
%ile	2.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.71	TaAffx.31044.1.S1_at	CA620075	-	-	4e-4	At3g25490	wall-associated kinase, putative	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.91	TaAffx.84909.1.S1_at	CA627312	-	-	2e-5	At5g67470	formin homology 2 domain-containing protein / FH2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.93	TaAffx.80013.1.S1_at	CA704301	-	-	1e+0	At4g18335	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.93	TaAffx.97931.1.S1_at	BQ801647	-	-	4e-1	At1g07950	surfeit locus protein 5 family protein / SURF5 family protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.93	TaAffx.91476.1.S1_at	BJ316914	-	-	7e-5	At3g17590	BSH (BUSHY GROWTH)	O.I.	H.G.	S.X.	Please select
-	0.7	0.90	TaAffx.79097.1.S1_at	CA721674	-	-	1e-2	At5g07060	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.9	99.4	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.8	97.2	GSM111210	genotype B11 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.4	96.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0	96.3	GSM143499	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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