Co-expression analysis

Gene ID TaAffx.30865.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At3g17261: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.74
%ile 94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.60.98TaAffx.30865.1.S1_s_atCA621506--4e+0At3g17261unknown proteinO.I.H.G.S.X.
0.8393.40.98Ta.23665.1.S1_atX14348.1ADP-glucose pyrophosophorylase-4e-23At5g19220APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)O.I.H.G.S.X.
0.7389.10.98Ta.12375.1.A1_s_atBQ172208--1e-7At1g32070ATNSI (NUCLEAR SHUTTLE INTERACTING)O.I.H.G.S.X.
0.7389.10.98Ta.28818.1.S1_atCA618617--6e-1Atcg00670-O.I.H.G.S.X.
0.7188.00.98TaAffx.114768.1.S1_atCA617363--2e-6At2g43560immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.6081.00.98Ta.6077.1.S1_atCA652767--4e-8At3g26710CCB1 (COFACTOR ASSEMBLY OF COMPLEX C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.999.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
7.598.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.398.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.198.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.495.2GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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