Co-expression analysis

Gene ID TaAffx.30621.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g48860: unknown protein (HF=7e-8)
Module size 10 genes
NF 0.24
%ile 40.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9094.80.90TaAffx.30621.1.S1_atCA623519--7e-8At3g48860unknown proteinO.I.H.G.S.X.
0.3854.70.93TaAffx.26782.1.S1_atCA685011--2e+1At5g14730unknown proteinO.I.H.G.S.X.
0.3854.70.94TaAffx.560.3.S1_atCA741730--4e+0At3g57930unknown proteinO.I.H.G.S.X.
0.2329.00.93Ta.20821.1.S1_atCA619240--8e-10At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.2125.50.93Ta.24576.2.S1_atBJ315269--7e-2At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.1922.40.94Ta.8956.1.A1_atBQ162686--3e+0At3g31350unknown proteinO.I.H.G.S.X.
0.1821.00.94TaAffx.78382.1.S1_atCA733352--2e+0At2g31140-O.I.H.G.S.X.
0.1517.10.94TaAffx.91595.1.S1_atBJ305839--1e+0At5g66590allergen V5/Tpx-1-related family proteinO.I.H.G.S.X.
0.1314.60.94TaAffx.117373.1.S1_atBQ605838--1e+0At3g10400RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1213.30.92TaAffx.39299.1.S1_atBG909724--2e+0At5g23395-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.899.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
11.299.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.399.0GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.198.8GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.098.8GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.897.9GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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