Co-expression analysis

Gene ID	TaAffx.30621.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g48860: unknown protein (HF=7e-8)
Module size	10 genes
NF	0.24
%ile	40.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	94.8	0.90	TaAffx.30621.1.S1_at	CA623519	-	-	7e-8	At3g48860	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.93	TaAffx.26782.1.S1_at	CA685011	-	-	2e+1	At5g14730	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.94	TaAffx.560.3.S1_at	CA741730	-	-	4e+0	At3g57930	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.93	Ta.20821.1.S1_at	CA619240	-	-	8e-10	At1g13440	GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.93	Ta.24576.2.S1_at	BJ315269	-	-	7e-2	At1g25155	anthranilate synthase beta subunit, putative	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.94	Ta.8956.1.A1_at	BQ162686	-	-	3e+0	At3g31350	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.94	TaAffx.78382.1.S1_at	CA733352	-	-	2e+0	At2g31140	-	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.94	TaAffx.91595.1.S1_at	BJ305839	-	-	1e+0	At5g66590	allergen V5/Tpx-1-related family protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.94	TaAffx.117373.1.S1_at	BQ605838	-	-	1e+0	At3g10400	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.92	TaAffx.39299.1.S1_at	BG909724	-	-	2e+0	At5g23395	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.8	99.7	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.2	99.3	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
9.3	99.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.1	98.8	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
8.0	98.8	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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