Co-expression analysis

Gene ID TaAffx.30436.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g70760: CRR23 ((chlororespiratory reduction 23) (HF=1e+0)
Module size 6 genes
NF 0.06
%ile 15.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.81TaAffx.30436.1.S1_atCA625340--1e+0At1g70760CRR23 ((chlororespiratory reduction 23)O.I.H.G.S.X.
0.1517.10.93Ta.16921.1.S1_atCA615164--4e+0At3g45200unknown proteinO.I.H.G.S.X.
0.1112.40.94TaAffx.65565.2.S1_atBJ232957--3e-1At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)O.I.H.G.S.X.
0.089.40.93Ta.13083.1.S1_atCA485953--3e-1At4g12040zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.056.70.89Ta.4242.2.S1_atCA605155--9e-1At1g27710glycine-rich proteinO.I.H.G.S.X.
0.012.40.93TaAffx.58533.1.S1_atCA618813--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.698.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.698.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.498.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.495.2GSM143513Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM246391SB62_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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