Co-expression analysis

Gene ID TaAffx.30299.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g24310: ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) (HF=4e+0)
Module size 38 genes
NF 0.34
%ile 54.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.30.86TaAffx.30299.1.S1_atCA626382--4e+0At5g24310ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)O.I.H.G.S.X.
0.5475.50.91TaAffx.123914.1.S1_atCN009931--1e+0At4g05400unknown proteinO.I.H.G.S.X.
0.5475.50.91TaAffx.55911.1.S1_atCA659604--1e+0At2g20550DNAJ chaperone C-terminal domain-containing proteinO.I.H.G.S.X.
0.5072.40.92TaAffx.114009.1.S1_atCA600107--1e+1At2g18690unknown proteinO.I.H.G.S.X.
0.4869.00.93Ta.29496.2.S1_atCA614697--2e-4At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.H.G.S.X.
0.4767.90.92TaAffx.13339.1.S1_atBG907271--1e+1At5g49280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4159.60.91Ta.22988.1.S1_atCA692783--3e+0At1g70830MLP28 (MLP-LIKE PROTEIN 28)O.I.H.G.S.X.
0.4159.60.91TaAffx.135182.1.S1_atCA673772--2e+1At5g23640unknown proteinO.I.H.G.S.X.
0.4159.60.93TaAffx.136997.1.S1_s_atCA669283--4e+0At3g49300proline-rich family proteinO.I.H.G.S.X.
0.4159.60.94TaAffx.23743.1.S1_atCA731059--3e-1At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.4159.60.93TaAffx.113092.1.S1_atCA618163--1e+0At5g02550unknown proteinO.I.H.G.S.X.
0.3448.10.94TaAffx.105503.1.S1_atCA733364--1e+0At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.3346.90.92TaAffx.135182.1.S1_x_atCA673772--2e+1At5g23640unknown proteinO.I.H.G.S.X.
0.3346.90.95TaAffx.78822.1.S1_atCA726823--1e+0At5g01075beta-galactosidaseO.I.H.G.S.X.
0.3346.90.94TaAffx.114049.1.S1_atCA599641--5e+0At4g33560unknown proteinO.I.H.G.S.X.
0.3346.90.94TaAffx.110652.1.S1_atCA656567--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.3346.90.93Ta.24549.3.S1_atCA606462--7e-14At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.3244.40.93TaAffx.117120.1.S1_atBQ608896--4e+0At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.H.G.S.X.
0.3244.40.94TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3142.70.93TaAffx.85723.1.S1_atCA620198--1e+0At4g13950RALFL31 (ralf-like 31)O.I.H.G.S.X.
0.3142.70.94TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.3142.70.92Ta.10343.3.S1_atCA598392--4e+0At2g39010PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E)O.I.H.G.S.X.
0.3142.70.94TaAffx.57555.1.S1_atCA618738--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.3040.90.90TaAffx.84501.1.S1_atCA635543--1e+0At1g68270AMP-dependent synthetase and ligase family proteinO.I.H.G.S.X.
0.3040.90.93Ta.26664.1.A1_atCD491507--4e-13At3g17390MTO3 (METHIONINE OVER-ACCUMULATOR 3)O.I.H.G.S.X.
0.3040.90.92Ta.6594.2.S1_x_atCA660418--4e+0At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.2839.20.94TaAffx.31212.1.S1_atCA618488--7e+0At5g20820auxin-responsive protein-relatedO.I.H.G.S.X.
0.2839.20.93Ta.7193.3.S1_atCA718160--1e+1At5g08400unknown proteinO.I.H.G.S.X.
0.2735.60.93Ta.11247.1.A1_atBJ251293--2e-8At1g33140PGY2 (PIGGYBACK2)O.I.H.G.S.X.
0.2735.60.92TaAffx.30193.1.S1_s_atCA627226--4e+0At1g62060unknown proteinO.I.H.G.S.X.
0.2633.60.95TaAffx.55653.1.S1_atCA663094--1e+1At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2633.60.91Ta.1326.3.S1_atCA604585--3e-5At5g16450dimethylmenaquinone methyltransferase family proteinO.I.H.G.S.X.
0.2532.10.94TaAffx.82721.1.S1_atCA668034--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.2430.30.92TaAffx.54172.1.S1_atCA684890--2e+1At3g47980integral membrane HPP family proteinO.I.H.G.S.X.
0.2024.00.93TaAffx.110270.1.S1_atCA661857--4e+0At4g02360unknown proteinO.I.H.G.S.X.
0.2024.00.93TaAffx.90026.1.S1_atBQ609544--3e-1At3g20830protein kinase family proteinO.I.H.G.S.X.
0.1922.40.94Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.1719.80.92TaAffx.113218.1.S1_atCA617187--5e-3At5g42050-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.999.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.699.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.999.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.998.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.597.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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