Co-expression analysis

Gene ID	TaAffx.29924.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g12900: DNA binding / transcription factor (HF=7e-2)
Module size	8 genes
NF	0.49
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.95	TaAffx.29924.1.S1_at	CA632639	-	-	7e-2	At2g12900	DNA binding / transcription factor	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	Ta.5439.3.S1_at	BJ278126	-	-	1e+0	At5g44610	MAP18 (Microtubule-associated Protein 18)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	TaAffx.123635.1.S1_at	BJ317672	-	-	9e-18	At1g13270	MAP1C (METHIONINE AMINOPEPTIDASE 1B)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	TaAffx.4349.1.A1_at	BJ307786	-	-	4e+0	At4g24974	-	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.96	TaAffx.96603.1.S1_at	CA624060	-	-	2e-6	At3g59890	dihydrodipicolinate reductase family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	TaAffx.38202.1.S1_at	BJ245313	-	-	1e-5	At3g59040	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	TaAffx.4349.2.S1_s_at	CA744198	-	-	1e+1	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	TaAffx.66699.1.S1_at	CA742365	-	-	7e-16	At3g53130	LUT1 (LUTEIN DEFICIENT 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.4	98.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.7	97.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.2	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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