Co-expression analysis

Gene ID TaAffx.29673.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g14240: - (HF=7e+0)
Module size 6 genes
NF 0.52
%ile 78.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.95TaAffx.29673.1.S1_atCA637588--7e+0At5g14240-O.I.H.G.S.X.
0.7790.80.95TaAffx.65688.1.S1_atBJ232502--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.6786.30.95TaAffx.107438.1.S1_atCA699780--1e-2At3g26110-O.I.H.G.S.X.
0.5576.80.94Ta.12290.2.S1_atBJ260055--4e-1At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.4058.40.95TaAffx.105660.1.S1_atCA731441--1e-3At3g01015-O.I.H.G.S.X.
0.1922.40.95TaAffx.111311.1.S1_atCA643595--1e+0At1g61940AtTLP4 (TUBBY LIKE PROTEIN 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.099.4GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.799.3GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.399.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.699.2GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.999.1GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.898.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.198.5GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
6.798.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.398.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.219542.1.S1_at, orthologous to the query gene, TaAffx.29673.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5078.6PtpAffx.219542.1.S1_atAt5g14240hypothetical protein-1e+1At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.3559.7PtpAffx.218055.1.S1_atAt5g14240hypothetical protein-5e-1At5g24860FPF1 (FLOWERING PROMOTING FACTOR 1)O.I.H.G.S.X.
0.3357.5PtpAffx.112763.1.A1_atAt5g14240hypothetical protein-7e+0At3g55490-O.I.H.G.S.X.
0.3255.2PtpAffx.219955.1.S1_atAt5g14240hypothetical protein-8e-1At1g63950heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3255.2PtpAffx.205326.1.S1_atAt5g14240hypothetical protein-3e-1At2g259103'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing proteinO.I.H.G.S.X.
0.3255.2PtpAffx.22183.1.S1_atAt5g14240--6e-3At4g06676-O.I.H.G.S.X.
0.2747.1PtpAffx.50439.1.A1_atAt5g14240--5e+0At4g26470calcium ion bindingO.I.H.G.S.X.
0.2543.6PtpAffx.203927.1.S1_atAt5g14240hypothetical protein-3e+0At5g38320unknown proteinO.I.H.G.S.X.
0.2543.6PtpAffx.18529.1.A1_atAt5g14240hypothetical protein-4e-1At2g21320zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2441.8PtpAffx.39546.1.A1_atAt5g14240hypothetical protein-7e+0At5g44495-O.I.H.G.S.X.
0.2238.3PtpAffx.81635.1.A1_atAt5g14240--1e+0At2g25880AtAUR2 (AtAurora2)O.I.H.G.S.X.
0.2136.5PtpAffx.85934.1.S1_atAt5g14240--3e+0At3g50800unknown proteinO.I.H.G.S.X.
0.2136.5PtpAffx.221841.1.S1_atAt5g14240cc-nbs-lrr resistance protein-4e-1At5g58210hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2034.6PtpAffx.54782.1.A1_s_atAt5g14240hypothetical protein-1e+0At1g69880ATH8 (thioredoxin H-type 8)O.I.H.G.S.X.
0.1321.6PtpAffx.216965.1.S1_atAt5g14240hypothetical protein-2e+0At3g14452unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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