Co-expression analysis

Gene ID TaAffx.28782.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11450: nodulin MtN21 family protein (HF=5e-1)
Module size 7 genes
NF 0.08
%ile 18.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.60.94TaAffx.28782.1.S1_atCA656307--5e-1At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.2024.00.95TaAffx.110780.1.S1_atCA654514--2e+1At5g45490disease resistance protein-relatedO.I.H.G.S.X.
0.1922.40.95Ta.24610.2.S1_a_atCA700421--1e+0At3g10525-O.I.H.G.S.X.
0.1011.30.96Ta.2270.2.S1_a_atBJ300544--7e-2At4g25720QC (GLUTAMINYL CYCLASE)O.I.H.G.S.X.
0.089.40.94TaAffx.59789.1.S1_atCA595294--3e-13At3g13560glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.056.70.95Ta.8052.2.S1_a_atCA605038--1e+0At3g27503SCRL19 (SCR-Like 19)O.I.H.G.S.X.
0.034.70.95Ta.6394.1.A1_atBJ309507--7e-15At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.598.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.396.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1617209_at, orthologous to the query gene, TaAffx.28782.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8093.61617209_atAt1g11450--7e-1At1g71330ATNAP5O.I.H.G.S.X.
0.9198.81610275_atAt1g11450hypothetical protein LOC100246410-1e-9At3g21250ATMRP6O.I.H.G.S.X.
0.9095.61608432_s_atAt1g11450hypothetical protein LOC100266054-3e-9At3g23690basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.8995.51613204_atAt1g11450glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917-4e-8At1g17180ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)O.I.H.G.S.X.
0.8594.91621201_atAt1g11450--3e-1At5g03870glutaredoxin family proteinO.I.H.G.S.X.
0.8394.61618333_atAt1g11450hypothetical protein LOC100264835-4e-3At3g63250HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.8193.71606513_s_atAt1g11450similar to Stress-related protein-2e+0At2g47780rubber elongation factor (REF) protein-relatedO.I.H.G.S.X.
0.7992.71609297_atAt1g11450--1e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.7992.71619742_atAt1g11450MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)O.I.H.G.S.X.
0.7892.61609870_atAt1g11450hypothetical protein LOC100259790-8e-56At3g60970ATMRP15O.I.H.G.S.X.
0.7691.51616836_atAt1g11450hypothetical protein LOC100260276-4e+0At1g35440CYCT1O.I.H.G.S.X.
0.7691.51609846_a_atAt1g11450proline-rich cell wall protein-like /// ripening-induced protein 1-like-6e-1Atcg00360-O.I.H.G.S.X.
0.7390.81620222_x_atAt1g11450proline-rich cell wall protein-like /// ripening-induced protein 1-like-6e-1Atcg00360-O.I.H.G.S.X.
0.7390.81621644_atAt1g11450--3e-9At3g23690basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.7088.61621395_atAt1g11450hypothetical protein LOC100243587 /// hypothetical protein LOC100251575-6e-7At1g78380ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)O.I.H.G.S.X.
0.6988.31617026_atAt1g11450--2e-1At2g43940thiol methyltransferase, putativeO.I.H.G.S.X.
0.6787.91614965_atAt1g11450MADS-box protein 4-6e-36At1g24260SEP3 (SEPALLATA3)O.I.H.G.S.X.
0.6685.11614418_atAt1g11450flowering-related B-class MADS-box protein-9e-15At3g54340AP3 (APETALA 3)O.I.H.G.S.X.
0.6685.11615375_atAt1g11450hypothetical protein LOC100267921-2e+0At3g48740nodulin MtN3 family proteinO.I.H.G.S.X.
0.6384.31617704_atAt1g11450hypothetical protein LOC100268006-1e-7At2g23610MES3 (METHYL ESTERASE 3)O.I.H.G.S.X.
0.6283.31612107_atAt1g11450hypothetical protein LOC100248597-6e+0At5g18040unknown proteinO.I.H.G.S.X.
0.6283.31609355_atAt1g11450hypothetical protein LOC100255606-2e-6At2g21490LEA (DEHYDRIN LEA)O.I.H.G.S.X.
0.6081.91617620_atAt1g11450hypothetical protein LOC100243687-1e+0At5g65660hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5779.81611561_a_atAt1g11450hypothetical protein LOC100240998-2e-2At4g36850-O.I.H.G.S.X.
0.4767.71619481_atAt1g11450hypothetical protein LOC100256947-2e-2At4g25140OLEO1 (OLEOSIN 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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