Co-expression analysis

Gene ID TaAffx.28782.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11450: nodulin MtN21 family protein (HF=5e-1)
Module size 7 genes
NF 0.08
%ile 18.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.60.94TaAffx.28782.1.S1_atCA656307--5e-1At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.2024.00.95TaAffx.110780.1.S1_atCA654514--2e+1At5g45490disease resistance protein-relatedO.I.H.G.S.X.
0.1922.40.95Ta.24610.2.S1_a_atCA700421--1e+0At3g10525-O.I.H.G.S.X.
0.1011.30.96Ta.2270.2.S1_a_atBJ300544--7e-2At4g25720QC (GLUTAMINYL CYCLASE)O.I.H.G.S.X.
0.089.40.94TaAffx.59789.1.S1_atCA595294--3e-13At3g13560glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.056.70.95Ta.8052.2.S1_a_atCA605038--1e+0At3g27503SCRL19 (SCR-Like 19)O.I.H.G.S.X.
0.034.70.95Ta.6394.1.A1_atBJ309507--7e-15At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.598.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.396.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.222570.1.S1_x_at, orthologous to the query gene, TaAffx.28782.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8497.1PtpAffx.222570.1.S1_x_atAt1g11450hypothetical protein-8e+0At5g37473-O.I.H.G.S.X.
0.3762.3PtpAffx.209560.1.S1_atAt1g11450DNA glycosylase-7e-42At5g04560DME (DEMETER)O.I.H.G.S.X.
0.2441.8PtpAffx.220424.1.S1_s_atAt1g11450oligopeptide transporter OPT family-1e-38At1g48370YSL8 (YELLOW STRIPE LIKE 8)O.I.H.G.S.X.
0.2340.5PtpAffx.211462.1.S1_atAt1g11450hypothetical protein-4e-14At2g45320unknown proteinO.I.H.G.S.X.
0.2340.5PtpAffx.101219.1.A1_a_atAt1g11450hypothetical protein-1e+0At4g39060-O.I.H.G.S.X.
0.2238.3PtpAffx.206919.1.S1_atAt1g11450hypothetical protein-1e+0At2g40200basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2034.6PtpAffx.49304.1.S1_atAt1g11450hypothetical protein-3e-39At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.1729.1PtpAffx.223018.1.S1_atAt1g11450hypothetical protein-1e-1At1g67520lectin protein kinase family proteinO.I.H.G.S.X.
0.1729.1PtpAffx.146058.2.A1_atAt1g11450f-box family protein /// f-box family protein-8e-2At5g62940Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.1626.9PtpAffx.121282.1.A1_atAt1g11450hypothetical protein-4e-1At3g28620zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1626.9PtpAffx.6381.1.S1_atAt1g11450integral membrane single C2 domain protein /// integral membrane single C2 domain protein-6e-10At3g61050NTMC2T4O.I.H.G.S.X.
0.1525.3PtpAffx.200093.1.S1_atAt1g11450hypothetical protein-3e-82At5g06120Ran-binding protein, putativeO.I.H.G.S.X.
0.1423.5PtpAffx.220742.1.S1_s_atAt1g11450hypothetical protein-1e-1At2g22610kinesin motor protein-relatedO.I.H.G.S.X.
0.1321.6PtpAffx.249.450.S1_atAt1g11450hypothetical protein-1e+0At1g52590-O.I.H.G.S.X.
0.1321.6PtpAffx.5176.1.A1_atAt1g11450--3e-1At5g03220transcriptional co-activator-relatedO.I.H.G.S.X.
0.1219.6PtpAffx.212242.1.S1_atAt1g11450cationic amino acid transporter-1e-64At3g03720CAT4 (CATIONIC AMINO ACID TRANSPORTER 4)O.I.H.G.S.X.
0.1016.3PtpAffx.213212.1.S1_atAt1g11450hypothetical protein-9e-1At5g43250NF-YC13 (NUCLEAR FACTOR Y, SUBUNIT C13)O.I.H.G.S.X.
0.1016.3PtpAffx.101422.1.A1_atAt1g11450hypothetical protein-2e-1At2g04066MATE efflux protein-relatedO.I.H.G.S.X.
0.1016.3PtpAffx.201708.1.S1_atAt1g11450hypothetical protein-2e-21At4g14713PPD1 (PEAPOD 1)O.I.H.G.S.X.
0.1016.3PtpAffx.208024.1.S1_atAt1g11450--2e-55At5g38830tRNA synthetase class I (C) family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.106245.1.A1_atAt1g11450hypothetical protein-5e-3At5g52500unknown proteinO.I.H.G.S.X.
0.0914.6Ptp.3296.1.S1_s_atAt1g11450hypothetical protein-1e-73At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.0812.9PtpAffx.205024.1.S1_atAt1g11450hypothetical protein-1e+0At5g46873-O.I.H.G.S.X.
0.058.3PtpAffx.92366.1.S1_atAt1g11450hypothetical protein-6e-3At1g56260unknown proteinO.I.H.G.S.X.
0.058.3PtpAffx.159029.3.A1_atAt1g11450hypothetical protein-7e-11At1g59520CW7O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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