Co-expression analysis

Gene ID TaAffx.28239.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11785: unknown protein (HF=2e+0)
Module size 35 genes
NF 0.48
%ile 73.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.60.92TaAffx.28239.1.S1_atCA663013--2e+0At1g11785unknown proteinO.I.H.G.S.X.
0.7489.40.92TaAffx.13339.1.S1_atBG907271--1e+1At5g49280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6986.90.93TaAffx.99246.2.S1_atCA657762--1e+0At3g16770ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)O.I.H.G.S.X.
0.6583.90.93TaAffx.31847.1.S1_atCA606601--1e+0At1g21864-O.I.H.G.S.X.
0.5979.80.93TaAffx.113092.1.S1_atCA618163--1e+0At5g02550unknown proteinO.I.H.G.S.X.
0.5879.20.95TaAffx.110167.1.S1_atCA662870--4e+0At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)O.I.H.G.S.X.
0.5779.20.95TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5576.80.94TaAffx.79532.1.S1_atCA713411--3e+1At4g02360unknown proteinO.I.H.G.S.X.
0.5576.80.94TaAffx.85723.1.S1_atCA620198--1e+0At4g13950RALFL31 (ralf-like 31)O.I.H.G.S.X.
0.5374.90.92TaAffx.136997.1.S1_s_atCA669283--4e+0At3g49300proline-rich family proteinO.I.H.G.S.X.
0.5374.90.94TaAffx.82721.1.S1_atCA668034--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.5273.70.94TaAffx.114049.1.S1_atCA599641--5e+0At4g33560unknown proteinO.I.H.G.S.X.
0.5273.70.94TaAffx.110652.1.S1_atCA656567--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.5273.70.93TaAffx.117120.1.S1_atBQ608896--4e+0At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.H.G.S.X.
0.5173.00.94TaAffx.23743.1.S1_atCA731059--3e-1At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.4869.00.94TaAffx.105503.1.S1_atCA733364--1e+0At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.4767.90.95TaAffx.78822.1.S1_atCA726823--1e+0At5g01075beta-galactosidaseO.I.H.G.S.X.
0.4666.80.95TaAffx.132656.2.S1_atCA600729--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.4159.60.93TaAffx.57764.1.S1_atCA625262--4e+0At1g27950LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)O.I.H.G.S.X.
0.4159.60.95TaAffx.85817.1.S1_atCA619362--4e+0At4g17800DNA-binding protein-relatedO.I.H.G.S.X.
0.4159.60.95TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4058.40.93TaAffx.53587.2.S1_atCA697989--7e-2At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.4058.40.94TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.4058.40.96Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.3854.70.94TaAffx.119081.1.S1_atBJ291857--2e+1At5g45700NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.3854.70.94Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.3753.00.96TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.3651.90.93TaAffx.105981.1.S1_x_atCA727065--3e-1At4g11870unknown proteinO.I.H.G.S.X.
0.3651.90.94TaAffx.57555.1.S1_atCA618738--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.3651.90.95TaAffx.55653.1.S1_atCA663094--1e+1At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3651.90.93TaAffx.78428.1.S1_atCA732797--1e+0At4g15610integral membrane family proteinO.I.H.G.S.X.
0.3448.10.92Ta.24549.3.S1_atCA606462--7e-14At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.3142.70.94TaAffx.35248.1.S1_atCA731653--1e+0At3g20620F-box family protein-relatedO.I.H.G.S.X.
0.2939.20.95TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.2633.60.94TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.799.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
10.299.2GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.799.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.798.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.098.5GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.297.5GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.697.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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