Co-expression analysis

Gene ID TaAffx.27409.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g02405: proline-rich family protein (HF=4e+0)
Module size 18 genes
NF 0.44
%ile 69.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.93TaAffx.27409.1.S1_atCA677175--4e+0At1g02405proline-rich family proteinO.I.H.G.S.X.
0.6182.00.94TaAffx.105660.1.S1_atCA731441--1e-3At3g01015-O.I.H.G.S.X.
0.5678.60.95TaAffx.53587.2.S1_atCA697989--7e-2At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5678.60.95TaAffx.82721.1.S1_atCA668034--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.5475.50.94TaAffx.113024.3.S1_atCA618057--3e-1At5g26700germin-like protein, putativeO.I.H.G.S.X.
0.4969.70.95TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4969.70.94Ta.14468.2.S1_atBJ267272--4e+0At2g26120glycine-rich proteinO.I.H.G.S.X.
0.4969.70.95Ta.21581.1.S1_atCA696527--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.4767.90.95TaAffx.110652.1.S1_atCA656567--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.4260.90.96TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4159.60.95TaAffx.39326.1.S1_atBG909116--5e+0At5g44170-O.I.H.G.S.X.
0.3753.00.95TaAffx.65688.1.S1_x_atBJ232502--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.3651.90.94Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3651.90.95Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3346.90.94TaAffx.118401.1.A1_atBQ170283--1e+0At2g47480unknown proteinO.I.H.G.S.X.
0.3244.40.95TaAffx.132656.2.S1_atCA600729--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.3142.70.94Ta.26652.1.A1_atCD491481--1e-3At1g36050unknown proteinO.I.H.G.S.X.
0.2329.00.94TaAffx.4857.1.S1_atCA730111--4e+0At1g77682-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.399.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
18.499.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
12.599.4GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
10.699.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.499.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.298.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.397.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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