Co-expression analysis

Gene ID TaAffx.26615.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g23640: unknown protein (HF=1e+1)
Module size 23 genes
NF 0.35
%ile 56.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7891.10.73TaAffx.26615.1.S1_atCA687136--1e+1At5g23640unknown proteinO.I.H.G.S.X.
0.4666.80.79TaAffx.56558.1.S1_atCA649078--2e+0At5g66985unknown proteinO.I.H.G.S.X.
0.4666.80.79TaAffx.70061.12.S1_atBJ233572--4e+0At3g27100-O.I.H.G.S.X.
0.4565.20.76TaAffx.6630.1.S1_atCA681363--3e+0At2g34185unknown proteinO.I.H.G.S.X.
0.4260.90.79TaAffx.7984.1.S1_atCA641268--2e+1At3g57440unknown proteinO.I.H.G.S.X.
0.4260.90.82TaAffx.31410.1.S1_atCA616653--3e-1At4g33130-O.I.H.G.S.X.
0.4058.40.82TaAffx.25951.1.S1_atCA693909--4e+0At3g03930protein kinase-relatedO.I.H.G.S.X.
0.3956.10.79TaAffx.25579.1.S1_atCA698168--9e-1At5g10070RNase L inhibitor protein-relatedO.I.H.G.S.X.
0.3651.90.81TaAffx.84870.1.S1_atAJ613575--2e-2At1g11240unknown proteinO.I.H.G.S.X.
0.3549.80.81TaAffx.7624.1.S1_atCA655465--3e+0At2g16490XH domain-containing proteinO.I.H.G.S.X.
0.3448.10.82TaAffx.7031.1.S1_atCA680305--3e-1At5g64040PSANO.I.H.G.S.X.
0.3448.10.79TaAffx.31309.1.S1_atCA617574--1e+1At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)O.I.H.G.S.X.
0.3346.90.79TaAffx.109217.1.S1_atCA678446--3e-3At1g23940adaptin family proteinO.I.H.G.S.X.
0.3346.90.79TaAffx.5820.1.S1_atCA697811--1e+0At5g49490AGL83 (AGAMOUS-LIKE 83)O.I.H.G.S.X.
0.3346.90.85TaAffx.111885.1.S1_atCA631180--4e+0At3g1678060S ribosomal protein L19 (RPL19B)O.I.H.G.S.X.
0.2939.20.84Ta.7125.1.A1_atBJ322003--1e+0At5g61650CYCP4O.I.H.G.S.X.
0.2939.20.78TaAffx.6679.1.S1_atCA680133--1e+0At4g37682-O.I.H.G.S.X.
0.2839.20.81TaAffx.1861.9.S1_x_atCA697326--3e+0At1g07040unknown proteinO.I.H.G.S.X.
0.2839.20.78TaAffx.27403.1.S1_atCA677254--8e+0At3g02290zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2633.60.78TaAffx.33403.1.A1_atBU808665--2e+0At4g14226unknown proteinO.I.H.G.S.X.
0.2532.10.82TaAffx.29362.1.S1_atCA644398--2e-1At1g78150unknown proteinO.I.H.G.S.X.
0.2227.10.80TaAffx.109350.1.S1_atCA676688--6e-2At4g14695unknown proteinO.I.H.G.S.X.
0.1821.00.79TaAffx.16070.1.S1_atBQ803461--3e-1Atcg00130-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.699.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
10.599.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.998.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.797.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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