Co-expression analysis

Gene ID	TaAffx.26470.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g21610: LOL2 (LSD ONE LIKE 2) (HF=4e+0)
Module size	6 genes
NF	0.55
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.95	TaAffx.26470.1.S1_at	CA688638	-	-	4e+0	At4g21610	LOL2 (LSD ONE LIKE 2)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	TaAffx.55930.1.S1_at	CA659349	-	-	6e+0	At5g63240	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	TaAffx.107511.1.S1_at	CA632217	-	-	2e+1	At5g57980	RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	TaAffx.119601.1.S1_at	BJ266980	-	-	9e+0	At5g59950	RNA and export factor-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.96	TaAffx.105451.1.S1_at	CA734135	-	-	1e+0	At3g06730	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.95	TaAffx.80426.1.S1_at	CA600418	-	-	4e-1	At2g12935	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
31.2	99.9	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
19.6	99.7	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
9.2	99.0	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.3	98.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM324489	Si- B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.8	93.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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