Co-expression analysis

Gene ID TaAffx.26027.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g03530: RABC2A (RAB GTPASE HOMOLOG C2A) (HF=3e+0)
Module size 6 genes
NF 0.01
%ile 3.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.90TaAffx.26027.1.S1_atCA692935--3e+0At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)O.I.H.G.S.X.
0.067.60.94Ta.9084.3.S1_atCA666296--1e+1At5g50050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.056.70.94TaAffx.52752.1.S1_atCA702216--4e+0At5g62610basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.023.60.94Ta.25400.1.A1_atCD490744--1e-1At1g62060unknown proteinO.I.H.G.S.X.
-0.70.93Ta.1058.2.S1_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
-0.70.94Ta.27101.10.S1_x_atAJ613323--1e-26At5g10980histone H3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
46.399.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.097.4GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM138194genotype J15 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.893.6GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.793.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.793.3GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.592.5GSM111218genotype F29 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.592.5GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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