Co-expression analysis

Gene ID TaAffx.2481.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g23780: unknown protein (HF=7e+0)
Module size 21 genes
NF 0.18
%ile 31.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8292.70.88TaAffx.2481.1.S1_atCD901658--7e+0At4g23780unknown proteinO.I.H.G.S.X.
0.3651.90.93Ta.20753.2.S1_atCA612239--5e-2At1g76340integral membrane family proteinO.I.H.G.S.X.
0.3448.10.93Ta.8560.1.A1_atBQ162057--8e-2At3g46830ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C)O.I.H.G.S.X.
0.3244.40.92Ta.11380.1.A1_atBJ253062--4e+0At5g10480PAS2 (PASTICCINO 2)O.I.H.G.S.X.
0.2839.20.94Ta.27657.3.S1_atBJ274615--1e-3At3g47550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2839.20.95Ta.26214.1.S1_atCD452860--6e-16At2g43240nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporterO.I.H.G.S.X.
0.2532.10.91TaAffx.84130.1.S1_atCA644137--5e-1At4g19030NLM1O.I.H.G.S.X.
0.1922.40.96Ta.5519.1.S1_x_atCK199483--2e-8At2g01330transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.1922.40.93Ta.5333.1.S1_atCD937316--5e-65At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.1922.40.91Ta.30123.1.S1_atBJ266625--1e+1At4g13150unknown proteinO.I.H.G.S.X.
0.1922.40.90TaAffx.52363.1.S1_s_atCA708539--9e+0At3g62040catalytic/ hydrolaseO.I.H.G.S.X.
0.1719.80.95TaAffx.15304.1.S1_atAJ611136--1e+1At5g36960unknown proteinO.I.H.G.S.X.
0.1517.10.92Ta.4217.1.S1_atBJ255910--9e-1At2g25700ASK3 (ARABIDOPSIS SKP1-LIKE 3)O.I.H.G.S.X.
0.1517.10.94Ta.7208.1.S1_atCD878004--1e+1At5g60615-O.I.H.G.S.X.
0.1415.80.94Ta.968.1.S1_atBE404188--6e-19At5g657502-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putativeO.I.H.G.S.X.
0.1415.80.95Ta.4216.1.S1_atBJ243718--4e-1At1g72170unknown proteinO.I.H.G.S.X.
0.1314.60.94Ta.22210.1.S1_atCA730373--1e+0At5g20165unknown proteinO.I.H.G.S.X.
0.0910.40.93Ta.22780.1.A1_atCA702032--3e-8At1g14530THH1 (TOM THREE HOMOLOG 1)O.I.H.G.S.X.
0.0910.40.95Ta.7027.1.S1_atCK204675--1e+0At3g16760tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.0910.40.93Ta.3523.1.S1_x_atCD934123--5e+0At3g24060self-incompatibility protein-relatedO.I.H.G.S.X.
0.078.60.94Ta.4515.1.S1_atBJ267518--1e+0At1g60625RALFL6 (RALF-LIKE 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.398.2GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM138149genotype F29 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.496.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.396.7GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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