Co-expression analysis

Gene ID	TaAffx.24778.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g07840: ankyrin repeat family protein (HF=4e+0)
Module size	6 genes
NF	0.02
%ile	7.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.76	TaAffx.24778.1.S1_at	CA712507	-	-	4e+0	At5g07840	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.93	TaAffx.58161.1.S1_at	CA621887	-	-	3e+0	At5g67070	RALFL34 (ralf-like 34)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.88	Ta.11206.2.S1_at	CA642108	-	-	4e+0	At4g38310	galactosyl transferase GMA12/MNN10 family protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.92	Ta.20393.1.S1_x_at	CA485809	-	-	3e-1	At1g78320	ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23)	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	Ta.14365.3.S1_a_at	CA604379	-	-	1e-37	At1g30510	ATRFNR2 (ROOT FNR 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	99.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.1	99.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.1	99.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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