Co-expression analysis

Gene ID TaAffx.24426.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g44430: PDF1.2c (plant defensin 1.2c) (HF=3e+0)
Module size 17 genes
NF 0.30
%ile 48.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6182.00.92TaAffx.24426.1.S1_atCA719619--3e+0At5g44430PDF1.2c (plant defensin 1.2c)O.I.H.G.S.X.
0.4666.80.93TaAffx.111137.1.S1_atCA647309--9e-1At5g10730binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.4565.20.93Ta.27051.1.A1_atBT009440.1--1e-3At4g09020ISA3 (ISOAMYLASE 3)O.I.H.G.S.X.
0.4464.50.93Ta.26199.3.S1_x_atCA610969--3e-1At3g17100transcription factorO.I.H.G.S.X.
0.3549.80.94Ta.11853.2.S1_x_atCA666021--4e+0At5g47080CKB1O.I.H.G.S.X.
0.3346.90.93Ta.20317.1.S1_x_atCA678146--4e+0At5g5985040S ribosomal protein S15A (RPS15aF)O.I.H.G.S.X.
0.3040.90.94TaAffx.57312.1.S1_atCA632121--7e-2At5g37550unknown proteinO.I.H.G.S.X.
0.3040.90.94Ta.24621.2.S1_x_atCA640800--4e+0At5g47080CKB1O.I.H.G.S.X.
0.2839.20.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.2532.10.95Ta.6666.2.S1_a_atCA640317--5e-12At3g49420Got1-like family proteinO.I.H.G.S.X.
0.2532.10.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.2227.10.95TaAffx.131315.1.S1_atBJ278064--2e-5At4g09810transporter-relatedO.I.H.G.S.X.
0.2125.50.95TaAffx.31914.1.S1_atCA605344--6e+0At2g42900-O.I.H.G.S.X.
0.2024.00.95Ta.4119.1.S1_atBJ264170--4e+0At3g04945LCR18 (Low-molecular-weight cysteine-rich 18)O.I.H.G.S.X.
0.1922.40.94Ta.6249.1.S1_atBJ300528--4e+0At1g36100myosin heavy chain-relatedO.I.H.G.S.X.
0.1821.00.96TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.1821.00.95TaAffx.105929.1.S1_atBJ226774--4e+0At5g19875unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.999.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.598.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.898.4GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.098.0GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.998.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.697.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.196.4GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage