Co-expression analysis

Gene ID	TaAffx.24009.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g02550: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.09
%ile	20.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.80	TaAffx.24009.1.S1_at	CA726741	-	-	1e+0	At5g02550	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.80	Ta.20299.1.S1_at	CA677654	-	-	1e+0	At5g64920	CIP8 (COP1-INTERACTING PROTEIN 8)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.80	Ta.22587.2.S1_at	CA630605	-	-	1e+0	At3g46320	histone H4	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.80	TaAffx.118867.1.S1_at	BJ304757	-	-	2e+0	At3g08990	yippee family protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.83	Ta.1160.2.S1_at	CA635399	-	-	1e+0	Atmg00490	-	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.79	TaAffx.128414.122.S1_at	CA655664	-	-	1e-65	Atmg00280	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.5	99.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
9.0	99.0	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.3	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5	98.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.0	98.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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