Co-expression analysis

Gene ID	TaAffx.23911.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g65830: leucine-rich repeat family protein (HF=1e+0)
Module size	6 genes
NF	0.78
%ile	96.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.94	TaAffx.23911.1.S1_at	CA728428	-	-	1e+0	At5g65830	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.93	TaAffx.123151.1.S1_at	BE427159	-	-	1e-4	At1g09750	chloroplast nucleoid DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.94	TaAffx.123151.1.S1_x_at	BE427159	-	-	1e-4	At1g09750	chloroplast nucleoid DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.94	TaAffx.97616.1.S1_at	CA685244	-	-	2e+0	At3g24590	PLSP1 (plastidic type I signal peptidase 1)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	TaAffx.13113.1.S1_at	CD926575	-	-	1e-2	At5g02570	histone H2B, putative	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.94	Ta.6416.2.S1_a_at	CA611148	-	-	1e+0	At2g31230	ATERF15 (Ethylene-responsive element binding factor 15)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.8	99.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.9	99.1	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
8.0	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM111208	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.5	96.9	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM111195	genotype C25 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM138147	genotype G13 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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