Co-expression analysis

Gene ID TaAffx.23456.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g27710: unknown protein (HF=7e-7)
Module size 11 genes
NF 0.25
%ile 41.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.96TaAffx.23456.1.S1_atCA734936--7e-7At5g27710unknown proteinO.I.H.G.S.X.
0.5374.90.97Ta.14759.1.S1_atCD490695--1e-3At3g51130unknown proteinO.I.H.G.S.X.
0.3346.90.98Ta.8384.1.S1_atBQ161820--2e+0At1g16530ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)O.I.H.G.S.X.
0.3346.90.98Ta.1709.1.S1_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)O.I.H.G.S.X.
0.3040.90.96Ta.4362.1.A1_atBJ241209--6e-3At3g06170TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.3040.90.98Ta.12532.1.S1_atBQ166155--2e-8At5g52580RAB GTPase activatorO.I.H.G.S.X.
0.2430.30.96Ta.1994.1.S1_a_atBQ166497--3e-3At3g20500PAP18 (PURPLE ACID PHOSPHATASE 18)O.I.H.G.S.X.
0.2329.00.97Ta.5359.1.S1_atBJ238105--3e-11At1g48790mov34 family proteinO.I.H.G.S.X.
0.1719.80.97Ta.8474.1.A1_atBQ161952--6e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.1415.80.97Ta.1709.1.S1_x_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)O.I.H.G.S.X.
0.0910.40.97Ta.4993.1.A1_atBQ168542--3e+0At1g49950DNA-binding protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.797.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.596.9GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.496.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.296.6GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.296.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.595.4GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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