Co-expression analysis

Gene ID TaAffx.23355.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g33220: enzyme inhibitor/ pectinesterase (HF=1e+1)
Module size 25 genes
NF 0.45
%ile 70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8192.40.91TaAffx.23355.1.S1_atCA736144--1e+1At4g33220enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.5979.80.94TaAffx.53587.2.S1_atCA697989--7e-2At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5678.60.95Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.5576.80.95TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5576.80.93TaAffx.128414.196.S1_atCA661623RuBisCO large subunit-8e-85Atmg00280-O.I.H.G.S.X.
0.5475.50.93TaAffx.110403.1.S1_atCA659315--7e-1At3g52520unknown proteinO.I.H.G.S.X.
0.5374.90.95TaAffx.112810.1.S1_atCA620736--3e-1At5g57180CIA2 (CHLOROPLAST IMPORT APPARATUS 2)O.I.H.G.S.X.
0.5173.00.94TaAffx.58984.1.S1_atCA610699--3e-1At5g13290CRN (CORYNE)O.I.H.G.S.X.
0.4969.70.96Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.4666.80.94TaAffx.105660.1.S1_atCA731441--1e-3At3g01015-O.I.H.G.S.X.
0.4666.80.94TaAffx.79532.1.S1_atCA713411--3e+1At4g02360unknown proteinO.I.H.G.S.X.
0.4666.80.93TaAffx.78163.1.S1_x_atCA736625--9e-3At4g08868unknown proteinO.I.H.G.S.X.
0.4464.50.93TaAffx.64105.1.S1_atBJ315276--4e+0At4g03153kinase interacting family proteinO.I.H.G.S.X.
0.4464.50.93TaAffx.78163.1.S1_atCA736625--9e-3At4g08868unknown proteinO.I.H.G.S.X.
0.4362.20.95TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4362.20.94Ta.25608.2.S1_a_atCA739102--3e+0At1g77765unknown proteinO.I.H.G.S.X.
0.4159.60.96Ta.6762.3.S1_atBJ246546--1e+0At5g61490-O.I.H.G.S.X.
0.4159.60.95Ta.21581.1.S1_atCA696527--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.4058.40.95Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.3549.80.94TaAffx.52953.1.S1_atCA698509--1e+0At5g55550RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3448.10.94TaAffx.110167.1.S1_atCA662870--4e+0At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)O.I.H.G.S.X.
0.3346.90.95TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.3040.90.94TaAffx.90026.1.S1_atBQ609544--3e-1At3g20830protein kinase family proteinO.I.H.G.S.X.
0.3040.90.94TaAffx.110652.1.S1_atCA656567--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.2839.20.94TaAffx.78822.1.S1_atCA726823--1e+0At5g01075beta-galactosidaseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.699.5GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.999.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.599.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.199.0GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.198.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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