Co-expression analysis

Gene ID	TaAffx.23015.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g63390: flavin-containing monooxygenase-related / FMO-related (HF=1e+0)
Module size	10 genes
NF	0.41
%ile	65.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.85	TaAffx.23015.1.S1_at	CA741744	-	-	1e+0	At1g63390	flavin-containing monooxygenase-related / FMO-related	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.89	Ta.20696.3.S1_x_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.91	TaAffx.5578.1.S1_at	CA706153	-	-	3e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.89	Ta.3696.2.S1_x_at	CA723776	-	-	2e-1	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.89	Ta.24112.2.S1_x_at	CA728131	-	-	3e-1	At2g41225	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.90	TaAffx.5529.1.S1_at	CA707923	-	-	3e+0	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.92	TaAffx.13113.2.S1_s_at	CA724231	-	-	1e+1	At5g66005	Expressed protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.90	TaAffx.106641.1.S1_at	CA710984	-	-	4e+0	At5g17290	APG5 (AUTOPHAGY 5)	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.88	Ta.20696.3.S1_s_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.88	Ta.5627.3.S1_x_at	CA696907	-	-	3e-1	At5g57000	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.3	99.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.1	98.8	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.0	98.0	GSM138158	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.6	97.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM111145	genotype RL4452 developing seed at 5 days after anthesis, biological rep1	GSE4929	wheat expression level polymorphism study parental genotypes 2 biological reps
5.1	97.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM111237	genotype F38b developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM111227	genotype F48 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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